`get_dimReduction`¶

Get dimension reduction

Description¶

Function to get a dimension reduction object

Usage¶

get_dimReduction(
  gobject,
  spat_unit = NULL,
  feat_type = NULL,
  reduction = c("cells", "feats"),
  reduction_method = c("pca", "umap", "tsne"),
  name = "pca",
  return_dimObj = FALSE
)

Arguments¶

Argument	Description
`gobject`	giotto object
`spat_unit`	spatial unit
`feat_type`	feature type
`reduction`	reduction on cells or features
`reduction_method`	reduction method (e.g. pca)
`name`	name of reduction results
`return_dimObj`	return full dimension object result

Value¶

dim reduction coordinates (default) or dim reduction object

Seealso¶

Other dimensional reduction data accessor functions:

``set_dimReduction` <#setdimreduction>`_

Other functions to get data from giotto object: ``get_NearestNetwork` <#getnearestnetwork>`_ , ``get_expression_values` <#getexpressionvalues>`_ , ``get_feature_info` <#getfeatureinfo>`_ , ``get_giottoImage` <#getgiottoimage>`_ , ``get_polygon_info` <#getpolygoninfo>`_ , ``get_spatialGrid` <#getspatialgrid>`_ , ``get_spatialNetwork` <#getspatialnetwork>`_ , ``get_spatial_enrichment` <#getspatialenrichment>`_ , ``get_spatial_locations` <#getspatiallocations>`_

get_dimReduction¶