makeSignMatrixDWLSfromMatrix

makeSignMatrixDWLSfromMatrix

Description

Function to convert a single-cell RNAseq matrix into a format

that can be used with ``runDWLSDeconv` <#rundwlsdeconv>`_ .

Usage

makeSignMatrixDWLSfromMatrix(matrix, sign_gene, cell_type_vector)

Arguments

Argument	Description
matrix	scRNA-seq matrix
sign_gene	genes to use (e.g. marker genes)
cell_type_vector	vector with cell types (length = ncol(matrix))

Value

matrix

Seealso

``runDWLSDeconv` <#rundwlsdeconv>`_